Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.46■□□□□ 0.71
PGBD1Q96JS3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 PRSS29P-201ENST00000440800 595 ntBASIC19.46■□□□□ 0.71
PGBD1Q96JS3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.46■□□□□ 0.71
PGBD1Q96JS3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 RNA5SP416-201ENST00000516838 111 ntBASIC19.45■□□□□ 0.7
PGBD1Q96JS3 AC107918.2-201ENST00000530817 355 ntBASIC19.45■□□□□ 0.7
PGBD1Q96JS3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 AC092865.6-201ENST00000642101 219 ntBASIC19.45■□□□□ 0.7
PGBD1Q96JS3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 PMS2P7-201ENST00000506558 1336 ntBASIC19.45■□□□□ 0.7
PGBD1Q96JS3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PGBD1Q96JS3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 AL591424.1-201ENST00000442569 1213 ntBASIC19.44■□□□□ 0.7
PGBD1Q96JS3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 AL513190.1-201ENST00000621254 727 ntBASIC19.44■□□□□ 0.7
PGBD1Q96JS3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 TUBB8P12-201ENST00000308911 1335 ntBASIC19.44■□□□□ 0.7
PGBD1Q96JS3 TUBB7P-202ENST00000428444 1305 ntBASIC19.44■□□□□ 0.7
PGBD1Q96JS3 TUBB8P7-204ENST00000567960 1332 ntBASIC19.44■□□□□ 0.7
PGBD1Q96JS3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PGBD1Q96JS3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.43■□□□□ 0.7
PGBD1Q96JS3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD1Q96JS3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PGBD1Q96JS3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.43■□□□□ 0.7
PGBD1Q96JS3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD1Q96JS3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.43■□□□□ 0.7
PGBD1Q96JS3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms