Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PMS2P1-201ENST00000431037 1228 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 AC098831.1-202ENST00000438821 336 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 MIR4751-201ENST00000578027 74 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 SLC25A6P4-201ENST00000586535 553 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 AC116407.3-201ENST00000623905 1129 ntBASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 FAM185BP-201ENST00000443595 716 ntBASIC16.12■□□□□ 0.17
UBE2E3Q969T4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBE2E3Q969T4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 SLC22A20-204ENST00000530038 1673 ntBASIC16.11■□□□□ 0.17
UBE2E3Q969T4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.11■□□□□ 0.17
UBE2E3Q969T4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 AL049840.3-201ENST00000602669 611 ntBASIC16.11■□□□□ 0.17
UBE2E3Q969T4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.11■□□□□ 0.17
UBE2E3Q969T4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms