Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 AL132655.2-201ENST00000596276 594 ntBASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 AL133215.2-201ENST00000609242 977 ntBASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 NEFHP1-201ENST00000412845 2629 ntBASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 KRT8P39-201ENST00000396270 1433 ntBASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AC007541.1-201ENST00000570282 1469 ntBASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AL079307.3-201ENST00000556114 283 ntBASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 TP53TG3HP-202ENST00000569755 579 ntBASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AL008721.1-201ENST00000609964 604 ntBASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AC004840.1-201ENST00000636359 365 ntBASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 CU639417.3-201ENST00000624240 1404 ntBASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF4Q8WZA2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 AL080243.2-201ENST00000418783 582 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 KRT17P7-201ENST00000451704 1104 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 SNX33P1-201ENST00000592116 1762 ntBASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF4Q8WZA2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms