Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 AC004877.2-201ENST00000623941 599 ntBASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 RNF216P1-203ENST00000404404 2427 ntBASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC148Q8NFR7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 KRT19P2-202ENST00000557173 1012 ntBASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 AL603756.1-201ENST00000606511 2163 ntBASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC148Q8NFR7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 AP000347.1-202ENST00000435868 847 ntBASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC148Q8NFR7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 AC025580.3-201ENST00000617932 1424 ntBASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 MIR940-201ENST00000401276 94 ntBASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 HMGA1P7-201ENST00000406908 502 ntBASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC148Q8NFR7 POLD2P1-201ENST00000511220 997 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms