Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC009299.2-201ENST00000482477 511 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 REXO1L2P-201ENST00000425429 2069 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 GAS2L1P1-201ENST00000420145 1480 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AP006587.1-201ENST00000534129 1502 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 RCC2P6-201ENST00000526625 1557 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 BX537318.2-201ENST00000624893 4162 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 GOLGA6L3-201ENST00000507199 1679 ntBASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC9.2□□□□□ -0.94
SPTSSBQ8NFR3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SPTSSBQ8NFR3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms