Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 AC073347.1-201ENST00000421633 2643 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 LIN28AP1-201ENST00000429574 405 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 HOMER2P1-201ENST00000455653 964 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 YBX1P2-201ENST00000489612 999 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 AC124864.1-201ENST00000623408 392 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 AC013268.4-201ENST00000637413 2228 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.72□□□□□ -0.21
LRTM2Q8N967 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRTM2Q8N967 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRTM2Q8N967 AL031731.1-201ENST00000642131 2094 ntBASIC13.71□□□□□ -0.21
LRTM2Q8N967 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 PMPCAP1-201ENST00000508114 1576 ntBASIC13.71□□□□□ -0.21
LRTM2Q8N967 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 BX664615.1-201ENST00000443558 458 ntBASIC13.71□□□□□ -0.21
LRTM2Q8N967 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 AC090616.6-201ENST00000582640 721 ntBASIC13.71□□□□□ -0.21
LRTM2Q8N967 TERC-201ENST00000602385 541 ntBASIC13.71□□□□□ -0.21
LRTM2Q8N967 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRTM2Q8N967 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.71□□□□□ -0.21
LRTM2Q8N967 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.71□□□□□ -0.22
LRTM2Q8N967 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRTM2Q8N967 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LRTM2Q8N967 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRTM2Q8N967 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LRTM2Q8N967 LINC01144-201ENST00000626198 1710 ntBASIC13.7□□□□□ -0.22
LRTM2Q8N967 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRTM2Q8N967 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRTM2Q8N967 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRTM2Q8N967 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRTM2Q8N967 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms