Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC079140.1-201ENST00000508039 487 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AC093520.2-201ENST00000561830 333 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AC027612.4-201ENST00000605371 583 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AC084121.4-201ENST00000641598 221 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AF228730.8-201ENST00000642140 221 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 HLA-A-202ENST00000376806 1854 ntBASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ARHGEF39Q8N4T4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 SPCS2P4-201ENST00000436160 681 ntBASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ARHGEF39Q8N4T4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 CNN2P11-201ENST00000429351 262 ntBASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms