Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SRRM1Q8IYB3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 DBET-201ENST00000630918 3363 ntBASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 VENTXP5-201ENST00000523979 775 ntBASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 AL353593.2-201ENST00000602529 1483 ntBASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 AC006538.1-201ENST00000567905 1585 ntBASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM1Q8IYB3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 HBZP1-201ENST00000354915 429 ntBASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 FAM220CP-201ENST00000395253 831 ntBASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 FDX1P1-201ENST00000449115 551 ntBASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SRRM1Q8IYB3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM1Q8IYB3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms