Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 AL691403.2-201ENST00000618460 490 ntBASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.62■□□□□ 0.41
SCUBE3Q8IX30 PCDHA14-201ENST00000506751 2298 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 HLA-A-202ENST00000376806 1854 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AC099398.1-201ENST00000567919 2776 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AC074386.1-202ENST00000463561 864 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AL139011.1-202ENST00000642063 584 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AC006538.1-201ENST00000567905 1585 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 AC084018.2-201ENST00000613093 2607 ntBASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCUBE3Q8IX30 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 KRT8P39-201ENST00000396270 1433 ntBASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 AC092919.2-201ENST00000623631 1645 ntBASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 AL512652.2-201ENST00000625156 1716 ntBASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCUBE3Q8IX30 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms