Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AC112504.1-201ENST00000623415 1841 ntBASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 AC006449.6-201ENST00000612330 2296 ntBASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 AC010653.2-201ENST00000623505 997 ntBASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 AL137784.3-201ENST00000623858 2288 ntBASIC14.75□□□□□ -0.05
LYSMD2Q8IV50 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 MIR4651-201ENST00000582622 73 ntBASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AP001412.1-201ENST00000608405 714 ntBASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AC092666.2-201ENST00000613287 246 ntBASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AC026471.5-201ENST00000615068 467 ntBASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 AL049637.2-201ENST00000641778 930 ntBASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD2Q8IV50 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms