Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LINC02228-204ENST00000642115 2962 ntBASIC15.55■□□□□ 0.08
TUBA1AQ71U36 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 AC010460.3-201ENST00000511359 1579 ntBASIC15.54■□□□□ 0.08
TUBA1AQ71U36 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.54■□□□□ 0.08
TUBA1AQ71U36 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 RCN1P2-201ENST00000398357 915 ntBASIC15.54■□□□□ 0.08
TUBA1AQ71U36 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 AC092053.1-201ENST00000605787 1936 ntBASIC15.54■□□□□ 0.08
TUBA1AQ71U36 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TUBA1AQ71U36 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 AC007967.3-201ENST00000434308 558 ntBASIC15.53■□□□□ 0.08
TUBA1AQ71U36 NUS1P1-201ENST00000446295 882 ntBASIC15.53■□□□□ 0.08
TUBA1AQ71U36 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBA1AQ71U36 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBA1AQ71U36 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms