Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
VPS13CQ709C8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.77□□□□□ -0.21
VPS13CQ709C8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VPS13CQ709C8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AC015936.2-201ENST00000593177 259 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AL645728.1-201ENST00000366221 2101 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AP005482.1-201ENST00000563722 1273 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AL139327.4-201ENST00000612362 153 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 CETN4P-206ENST00000642099 2168 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AC087499.6-201ENST00000411576 835 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 AC061975.2-201ENST00000581722 295 ntBASIC13.76□□□□□ -0.21
VPS13CQ709C8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.76□□□□□ -0.21
VPS13CQ709C8 AL354751.1-201ENST00000412768 1863 ntBASIC13.75□□□□□ -0.21
VPS13CQ709C8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC092933.1-201ENST00000393644 945 ntBASIC13.75□□□□□ -0.21
VPS13CQ709C8 KRT223P-202ENST00000449164 1292 ntBASIC13.75□□□□□ -0.21
VPS13CQ709C8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13CQ709C8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
VPS13CQ709C8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13CQ709C8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13CQ709C8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13CQ709C8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13CQ709C8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13CQ709C8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms