Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 MIR4745-201ENST00000577608 62 ntBASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 AC073389.1-201ENST00000595595 795 ntBASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 FO538757.1-201ENST00000623083 1397 ntBASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC62Q6P9F0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC62Q6P9F0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 TREML5P-201ENST00000421694 576 ntBASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC62Q6P9F0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
CCDC62Q6P9F0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC62Q6P9F0 PP12613-201ENST00000424958 2230 ntBASIC18.77■□□□□ 0.59
CCDC62Q6P9F0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC62Q6P9F0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC62Q6P9F0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC62Q6P9F0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms