Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 LINC01451-201ENST00000623792 534 ntBASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEM53Q6P2H8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 COX5BP2-201ENST00000392354 334 ntBASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 AC096582.2-201ENST00000510860 516 ntBASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 AP005901.3-202ENST00000581653 237 ntBASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 AC099336.1-202ENST00000602961 463 ntBASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TMEM53Q6P2H8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TMEM53Q6P2H8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.46■□□□□ 0.06
TMEM53Q6P2H8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TMEM53Q6P2H8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.46■□□□□ 0.06
TMEM53Q6P2H8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM53Q6P2H8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM53Q6P2H8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 POM121L3P-201ENST00000419331 1163 ntBASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 IGHV3-47-201ENST00000425060 335 ntBASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 AC122714.2-201ENST00000502787 707 ntBASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 MIR3652-201ENST00000579335 131 ntBASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 AC010460.3-201ENST00000511359 1579 ntBASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TMEM53Q6P2H8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM53Q6P2H8 AL359258.3-201ENST00000622910 2331 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms