Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 FGFR3P6-201ENST00000457012 610 ntBASIC16.35■□□□□ 0.21
SGO1Q5FBB7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 LINC01711-201ENST00000598340 967 ntBASIC16.35■□□□□ 0.21
SGO1Q5FBB7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SGO1Q5FBB7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 DOC2GP-204ENST00000639052 2548 ntBASIC16.34■□□□□ 0.21
SGO1Q5FBB7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 AC139887.3-201ENST00000568585 713 ntBASIC16.34■□□□□ 0.21
SGO1Q5FBB7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 AL139424.1-201ENST00000607572 797 ntBASIC16.34■□□□□ 0.21
SGO1Q5FBB7 AL589182.2-201ENST00000619332 1049 ntBASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ALOX12P2-203ENST00000570921 1945 ntBASIC16.34■□□□□ 0.21
SGO1Q5FBB7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGO1Q5FBB7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.33■□□□□ 0.21
SGO1Q5FBB7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.33■□□□□ 0.2
SGO1Q5FBB7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms