Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 PMS2P4-201ENST00000412466 1052 ntBASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 AP000347.1-202ENST00000435868 847 ntBASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 AL671883.3-201ENST00000603274 991 ntBASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 AC092865.6-201ENST00000642101 219 ntBASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE4Q2TBC4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 MIR940-201ENST00000401276 94 ntBASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 AC140658.5-201ENST00000438532 169 ntBASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 GPAA1P2-202ENST00000606848 1787 ntBASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRICKLE4Q2TBC4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AC074386.1-202ENST00000463561 864 ntBASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 POLD2P1-201ENST00000511220 997 ntBASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 PGAM5P1-201ENST00000518923 814 ntBASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.55■□□□□ 0.08
PRICKLE4Q2TBC4 AL009183.1-201ENST00000603760 355 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms