Protein–RNA interactions for Protein: Q2M389

WASHC4, WASH complex subunit 4, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WASHC4Q2M389 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.68■□□□□ 0.9
WASHC4Q2M389 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
WASHC4Q2M389 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WASHC4Q2M389 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.68■□□□□ 0.9
WASHC4Q2M389 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
WASHC4Q2M389 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 AL158211.3-201ENST00000607385 239 ntBASIC20.67■□□□□ 0.9
WASHC4Q2M389 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 LETM1P2-201ENST00000597330 2178 ntBASIC20.67■□□□□ 0.9
WASHC4Q2M389 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
WASHC4Q2M389 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WASHC4Q2M389 OR6D1P-203ENST00000641209 4860 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 HCG4-201ENST00000418983 998 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 FAM207CP-201ENST00000443486 507 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 AL512638.1-201ENST00000457493 794 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 AC097493.3-201ENST00000509725 367 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 ALG1L8P-201ENST00000533887 760 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 LINC02560-201ENST00000596379 459 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
WASHC4Q2M389 AL645608.8-201ENST00000606034 2086 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 AC026471.1-201ENST00000564629 3026 ntBASIC20.66■□□□□ 0.9
WASHC4Q2M389 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
WASHC4Q2M389 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.65■□□□□ 0.9
WASHC4Q2M389 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 AC069120.2-201ENST00000524091 540 ntBASIC20.65■□□□□ 0.9
WASHC4Q2M389 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 MIR6080-201ENST00000617359 66 ntBASIC20.65■□□□□ 0.9
WASHC4Q2M389 AC008267.7-201ENST00000624570 1194 ntBASIC20.65■□□□□ 0.9
WASHC4Q2M389 AC008761.3-201ENST00000624803 892 ntBASIC20.65■□□□□ 0.9
WASHC4Q2M389 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.65■□□□□ 0.9
WASHC4Q2M389 AC108860.2-201ENST00000562760 2183 ntBASIC20.65■□□□□ 0.9
WASHC4Q2M389 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WASHC4Q2M389 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
WASHC4Q2M389 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.64■□□□□ 0.9
WASHC4Q2M389 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
WASHC4Q2M389 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
WASHC4Q2M389 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms