Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.93■□□□□ 0.62
CCNA1P78396 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCNA1P78396 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.93■□□□□ 0.62
CCNA1P78396 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.93■□□□□ 0.62
CCNA1P78396 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CCNA1P78396 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.93■□□□□ 0.62
CCNA1P78396 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCNA1P78396 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCNA1P78396 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCNA1P78396 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.93■□□□□ 0.62
CCNA1P78396 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.93■□□□□ 0.62
CCNA1P78396 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 BTBD7P1-201ENST00000447253 1453 ntBASIC18.92■□□□□ 0.62
CCNA1P78396 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCNA1P78396 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCNA1P78396 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCNA1P78396 AC098614.1-201ENST00000368528 745 ntBASIC18.92■□□□□ 0.62
CCNA1P78396 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 MEIS3P1-201ENST00000495167 958 ntBASIC18.92■□□□□ 0.62
CCNA1P78396 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 AL079307.3-201ENST00000556114 283 ntBASIC18.92■□□□□ 0.62
CCNA1P78396 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 AC140912.1-201ENST00000577171 1054 ntBASIC18.92■□□□□ 0.62
CCNA1P78396 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNA1P78396 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCNA1P78396 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.92■□□□□ 0.62
CCNA1P78396 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNA1P78396 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCNA1P78396 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.91■□□□□ 0.62
CCNA1P78396 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.91■□□□□ 0.62
CCNA1P78396 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.91■□□□□ 0.62
CCNA1P78396 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNA1P78396 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.91■□□□□ 0.62
CCNA1P78396 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.91■□□□□ 0.62
CCNA1P78396 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.91■□□□□ 0.62
CCNA1P78396 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.91■□□□□ 0.62
CCNA1P78396 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.91■□□□□ 0.62
CCNA1P78396 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.91■□□□□ 0.62
CCNA1P78396 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.91■□□□□ 0.62
CCNA1P78396 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCNA1P78396 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNA1P78396 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms