Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.99□□□□□ -0.49
UBE2D3P61077 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
UBE2D3P61077 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
UBE2D3P61077 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
UBE2D3P61077 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 ABCD1P5-201ENST00000445663 754 ntBASIC11.99□□□□□ -0.49
UBE2D3P61077 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.99□□□□□ -0.49
UBE2D3P61077 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 AC012615.1-201ENST00000565797 1299 ntBASIC11.99□□□□□ -0.49
UBE2D3P61077 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 MIR3180-1-201ENST00000580374 94 ntBASIC11.99□□□□□ -0.49
UBE2D3P61077 MIR3180-3-201ENST00000584616 94 ntBASIC11.99□□□□□ -0.49
UBE2D3P61077 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 FAM45BP-202ENST00000592932 1624 ntBASIC11.99□□□□□ -0.49
UBE2D3P61077 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UBE2D3P61077 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2D3P61077 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2D3P61077 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
UBE2D3P61077 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 AC097637.2-201ENST00000624096 1997 ntBASIC11.98□□□□□ -0.49
UBE2D3P61077 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 FLJ16779-201ENST00000612722 7638 ntBASIC11.98□□□□□ -0.49
UBE2D3P61077 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2D3P61077 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.98□□□□□ -0.49
UBE2D3P61077 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.98□□□□□ -0.49
UBE2D3P61077 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2D3P61077 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
UBE2D3P61077 AC069148.1-201ENST00000608741 768 ntBASIC11.98□□□□□ -0.49
UBE2D3P61077 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 AC073592.4-201ENST00000623827 446 ntBASIC11.98□□□□□ -0.49
UBE2D3P61077 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2D3P61077 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.98□□□□□ -0.49
UBE2D3P61077 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2D3P61077 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2D3P61077 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms