Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
AP1S2P56377 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 VN2R19P-201ENST00000442399 1052 ntBASIC16.33■□□□□ 0.2
AP1S2P56377 AC009947.1-201ENST00000444350 727 ntBASIC16.33■□□□□ 0.2
AP1S2P56377 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP1S2P56377 CXCL1P1-201ENST00000502804 216 ntBASIC16.33■□□□□ 0.2
AP1S2P56377 RNA5SP415-201ENST00000517246 115 ntBASIC16.33■□□□□ 0.2
AP1S2P56377 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.33■□□□□ 0.2
AP1S2P56377 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.33■□□□□ 0.2
AP1S2P56377 ACTL9-202ENST00000612068 1252 ntBASIC16.33■□□□□ 0.2
AP1S2P56377 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.33■□□□□ 0.2
AP1S2P56377 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.33■□□□□ 0.2
AP1S2P56377 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S2P56377 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP1S2P56377 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S2P56377 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP1S2P56377 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.32■□□□□ 0.2
AP1S2P56377 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S2P56377 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
AP1S2P56377 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.32■□□□□ 0.2
AP1S2P56377 AC079776.4-201ENST00000511039 504 ntBASIC16.32■□□□□ 0.2
AP1S2P56377 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.32■□□□□ 0.2
AP1S2P56377 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S2P56377 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.32■□□□□ 0.2
AP1S2P56377 UBALD1-205ENST00000590891 2641 ntBASIC16.32■□□□□ 0.2
AP1S2P56377 AC012569.1-201ENST00000591191 1524 ntBASIC16.32■□□□□ 0.2
AP1S2P56377 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.32■□□□□ 0.2
AP1S2P56377 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
AP1S2P56377 TNRC18P3-201ENST00000441896 2691 ntBASIC16.32■□□□□ 0.2
AP1S2P56377 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP1S2P56377 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP1S2P56377 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 AC124067.4-201ENST00000519691 2379 ntBASIC16.31■□□□□ 0.2
AP1S2P56377 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S2P56377 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 CRYGEP-201ENST00000412192 528 ntBASIC16.31■□□□□ 0.2
AP1S2P56377 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.31■□□□□ 0.2
AP1S2P56377 MIR4515-201ENST00000584082 81 ntBASIC16.31■□□□□ 0.2
AP1S2P56377 Z83851.2-201ENST00000609564 659 ntBASIC16.31■□□□□ 0.2
AP1S2P56377 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP1S2P56377 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP1S2P56377 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP1S2P56377 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP1S2P56377 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP1S2P56377 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.31■□□□□ 0.2
AP1S2P56377 AL512652.2-201ENST00000625156 1716 ntBASIC16.31■□□□□ 0.2
AP1S2P56377 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms