Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.3■□□□□ 0.52
NCKAP1LP55160 GGT3P-204ENST00000453783 1664 ntBASIC18.3■□□□□ 0.52
NCKAP1LP55160 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.3■□□□□ 0.52
NCKAP1LP55160 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKAP1LP55160 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKAP1LP55160 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.3■□□□□ 0.52
NCKAP1LP55160 GPAA1P2-202ENST00000606848 1787 ntBASIC18.3■□□□□ 0.52
NCKAP1LP55160 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.3■□□□□ 0.52
NCKAP1LP55160 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCKAP1LP55160 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 ELL2P1-201ENST00000413990 1906 ntBASIC18.29■□□□□ 0.52
NCKAP1LP55160 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 KRT18P13-201ENST00000400056 1290 ntBASIC18.29■□□□□ 0.52
NCKAP1LP55160 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKAP1LP55160 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKAP1LP55160 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 AC016027.1-202ENST00000607927 1699 ntBASIC18.28■□□□□ 0.52
NCKAP1LP55160 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 RARRES2P8-201ENST00000566335 367 ntBASIC18.28■□□□□ 0.52
NCKAP1LP55160 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 MIR3687-2-201ENST00000577708 61 ntBASIC18.28■□□□□ 0.52
NCKAP1LP55160 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 MIR3687-1-201ENST00000614492 61 ntBASIC18.28■□□□□ 0.52
NCKAP1LP55160 WASH6P-202ENST00000359512 1437 ntBASIC18.28■□□□□ 0.52
NCKAP1LP55160 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NCKAP1LP55160 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NCKAP1LP55160 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCKAP1LP55160 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCKAP1LP55160 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCKAP1LP55160 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NCKAP1LP55160 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.27■□□□□ 0.52
NCKAP1LP55160 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCKAP1LP55160 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NCKAP1LP55160 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCKAP1LP55160 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NCKAP1LP55160 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
NCKAP1LP55160 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NCKAP1LP55160 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.27■□□□□ 0.51
NCKAP1LP55160 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCKAP1LP55160 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
NCKAP1LP55160 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1LP55160 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms