Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ITGA8P53708 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
ITGA8P53708 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA8P53708 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA8P53708 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA8P53708 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ITGA8P53708 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA8P53708 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA8P53708 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA8P53708 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA8P53708 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.25■□□□□ 0.35
ITGA8P53708 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA8P53708 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ITGA8P53708 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA8P53708 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 SNX33P1-201ENST00000592116 1762 ntBASIC17.25■□□□□ 0.35
ITGA8P53708 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA8P53708 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA8P53708 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.24■□□□□ 0.35
ITGA8P53708 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ITGA8P53708 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
ITGA8P53708 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 POM121L3P-201ENST00000419331 1163 ntBASIC17.24■□□□□ 0.35
ITGA8P53708 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ITGA8P53708 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.24■□□□□ 0.35
ITGA8P53708 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 AL353135.1-201ENST00000606729 504 ntBASIC17.24■□□□□ 0.35
ITGA8P53708 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
ITGA8P53708 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.24■□□□□ 0.35
ITGA8P53708 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA8P53708 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ITGA8P53708 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.24■□□□□ 0.35
ITGA8P53708 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.23■□□□□ 0.35
ITGA8P53708 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ITGA8P53708 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.23■□□□□ 0.35
ITGA8P53708 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.23■□□□□ 0.35
ITGA8P53708 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ITGA8P53708 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITGA8P53708 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms