Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.95□□□□□ -0.02
SRP9P49458 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.95□□□□□ -0.02
SRP9P49458 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
SRP9P49458 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.95□□□□□ -0.02
SRP9P49458 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 AC012313.10-201ENST00000623509 926 ntBASIC14.95□□□□□ -0.02
SRP9P49458 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 AL365203.3-201ENST00000609742 2057 ntBASIC14.95□□□□□ -0.02
SRP9P49458 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP9P49458 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP9P49458 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SRP9P49458 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP9P49458 AC093525.9-201ENST00000624961 1746 ntBASIC14.95□□□□□ -0.02
SRP9P49458 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.94□□□□□ -0.02
SRP9P49458 SLC25A1P3-201ENST00000395415 828 ntBASIC14.94□□□□□ -0.02
SRP9P49458 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.94□□□□□ -0.02
SRP9P49458 AC005104.2-201ENST00000427818 678 ntBASIC14.94□□□□□ -0.02
SRP9P49458 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.94□□□□□ -0.02
SRP9P49458 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.94□□□□□ -0.02
SRP9P49458 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.94□□□□□ -0.02
SRP9P49458 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.94□□□□□ -0.02
SRP9P49458 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SRP9P49458 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP9P49458 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP9P49458 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP9P49458 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.93□□□□□ -0.02
SRP9P49458 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP9P49458 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP9P49458 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.93□□□□□ -0.02
SRP9P49458 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.93□□□□□ -0.02
SRP9P49458 AC109462.3-201ENST00000573934 613 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms