Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
MDH1P40925 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.88■□□□□ 0.29
MDH1P40925 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.88■□□□□ 0.29
MDH1P40925 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MDH1P40925 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.88■□□□□ 0.29
MDH1P40925 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MDH1P40925 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.88■□□□□ 0.29
MDH1P40925 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 KRT8P10-201ENST00000450021 1447 ntBASIC16.87■□□□□ 0.29
MDH1P40925 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.87■□□□□ 0.29
MDH1P40925 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 AC107956.1-201ENST00000494359 873 ntBASIC16.87■□□□□ 0.29
MDH1P40925 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.87■□□□□ 0.29
MDH1P40925 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.87■□□□□ 0.29
MDH1P40925 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.87■□□□□ 0.29
MDH1P40925 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MDH1P40925 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MDH1P40925 AL021920.2-201ENST00000624828 1351 ntBASIC16.87■□□□□ 0.29
MDH1P40925 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MDH1P40925 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MDH1P40925 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.86■□□□□ 0.29
MDH1P40925 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MDH1P40925 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.86■□□□□ 0.29
MDH1P40925 AC009336.1-201ENST00000608941 1553 ntBASIC16.86■□□□□ 0.29
MDH1P40925 AL391807.1-203ENST00000604392 2365 ntBASIC16.86■□□□□ 0.29
MDH1P40925 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
MDH1P40925 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.86■□□□□ 0.29
MDH1P40925 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.86■□□□□ 0.29
MDH1P40925 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.86■□□□□ 0.29
MDH1P40925 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.86■□□□□ 0.29
MDH1P40925 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.86■□□□□ 0.29
MDH1P40925 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
MDH1P40925 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.86■□□□□ 0.29
MDH1P40925 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MDH1P40925 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 CICP24-201ENST00000605464 2705 ntBASIC16.86■□□□□ 0.29
MDH1P40925 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MDH1P40925 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MDH1P40925 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.85■□□□□ 0.29
MDH1P40925 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.85■□□□□ 0.29
MDH1P40925 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MDH1P40925 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.85■□□□□ 0.29
MDH1P40925 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.85■□□□□ 0.29
MDH1P40925 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MDH1P40925 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.85■□□□□ 0.29
MDH1P40925 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MDH1P40925 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.85■□□□□ 0.29
MDH1P40925 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.85■□□□□ 0.29
MDH1P40925 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.85■□□□□ 0.29
MDH1P40925 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.85■□□□□ 0.29
MDH1P40925 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.85■□□□□ 0.29
MDH1P40925 AC013467.2-201ENST00000605472 835 ntBASIC16.85■□□□□ 0.29
MDH1P40925 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.85■□□□□ 0.29
MDH1P40925 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MDH1P40925 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms