Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT2P35908 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT2P35908 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
KRT2P35908 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 HMGA1P7-201ENST00000406908 502 ntBASIC19.19■□□□□ 0.66
KRT2P35908 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT2P35908 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT2P35908 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.19■□□□□ 0.66
KRT2P35908 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT2P35908 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.19■□□□□ 0.66
KRT2P35908 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
KRT2P35908 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT2P35908 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT2P35908 AL031432.2-201ENST00000566714 459 ntBASIC19.19■□□□□ 0.66
KRT2P35908 AL928711.1-201ENST00000570165 459 ntBASIC19.19■□□□□ 0.66
KRT2P35908 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT2P35908 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 AL031731.1-201ENST00000642131 2094 ntBASIC19.19■□□□□ 0.66
KRT2P35908 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT2P35908 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT2P35908 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT2P35908 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT2P35908 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT2P35908 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT2P35908 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KRT2P35908 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
KRT2P35908 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 ALOX12P2-203ENST00000570921 1945 ntBASIC19.18■□□□□ 0.66
KRT2P35908 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT2P35908 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KRT2P35908 AC106730.1-201ENST00000566722 1090 ntBASIC19.18■□□□□ 0.66
KRT2P35908 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
KRT2P35908 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT2P35908 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT2P35908 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRT2P35908 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KRT2P35908 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT2P35908 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT2P35908 GGT3P-204ENST00000453783 1664 ntBASIC19.17■□□□□ 0.66
KRT2P35908 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT2P35908 GGT4P-201ENST00000623672 1708 ntBASIC19.17■□□□□ 0.66
KRT2P35908 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KRT2P35908 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT2P35908 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT2P35908 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.17■□□□□ 0.66
KRT2P35908 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
KRT2P35908 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT2P35908 KRT18P2-201ENST00000447938 1258 ntBASIC19.17■□□□□ 0.66
KRT2P35908 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
KRT2P35908 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT2P35908 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.17■□□□□ 0.66
KRT2P35908 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT2P35908 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT2P35908 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.17■□□□□ 0.66
KRT2P35908 AC018845.2-201ENST00000568326 409 ntBASIC19.17■□□□□ 0.66
KRT2P35908 AC023141.13-201ENST00000604991 943 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms