Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 ELK2BP-201ENST00000415014 1224 ntBASIC17.71■□□□□ 0.43
PCK1P35558 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.71■□□□□ 0.43
PCK1P35558 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.71■□□□□ 0.43
PCK1P35558 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.71■□□□□ 0.43
PCK1P35558 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCK1P35558 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCK1P35558 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 TOP3BP1-201ENST00000420768 1380 ntBASIC17.7■□□□□ 0.42
PCK1P35558 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 AL391256.1-201ENST00000443260 1855 ntBASIC17.7■□□□□ 0.42
PCK1P35558 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.7■□□□□ 0.42
PCK1P35558 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.7■□□□□ 0.42
PCK1P35558 RPS2P1-201ENST00000434010 821 ntBASIC17.7■□□□□ 0.42
PCK1P35558 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 RNPS1P1-201ENST00000507437 918 ntBASIC17.7■□□□□ 0.42
PCK1P35558 OR7E14P-202ENST00000530490 1290 ntBASIC17.7■□□□□ 0.42
PCK1P35558 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.7■□□□□ 0.42
PCK1P35558 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.7■□□□□ 0.42
PCK1P35558 AC013467.2-201ENST00000605472 835 ntBASIC17.7■□□□□ 0.42
PCK1P35558 TP73-AS1-207ENST00000624167 988 ntBASIC17.7■□□□□ 0.42
PCK1P35558 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
PCK1P35558 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
PCK1P35558 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.7■□□□□ 0.42
PCK1P35558 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCK1P35558 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCK1P35558 AC063926.3-201ENST00000624734 5658 ntBASIC17.7■□□□□ 0.42
PCK1P35558 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.69■□□□□ 0.42
PCK1P35558 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.69■□□□□ 0.42
PCK1P35558 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.69■□□□□ 0.42
PCK1P35558 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.69■□□□□ 0.42
PCK1P35558 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCK1P35558 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.69■□□□□ 0.42
PCK1P35558 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 AC073621.1-201ENST00000392730 636 ntBASIC17.69■□□□□ 0.42
PCK1P35558 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 AC018712.1-201ENST00000455767 687 ntBASIC17.69■□□□□ 0.42
PCK1P35558 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.69■□□□□ 0.42
PCK1P35558 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.69■□□□□ 0.42
PCK1P35558 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PCK1P35558 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCK1P35558 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.69■□□□□ 0.42
PCK1P35558 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.69■□□□□ 0.42
PCK1P35558 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCK1P35558 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.69■□□□□ 0.42
PCK1P35558 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PCK1P35558 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCK1P35558 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms