Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NCK1P16333 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
NCK1P16333 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.89■□□□□ 0.13
NCK1P16333 AL021920.2-201ENST00000624828 1351 ntBASIC15.89■□□□□ 0.13
NCK1P16333 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NCK1P16333 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 AC005521.1-201ENST00000393351 872 ntBASIC15.89■□□□□ 0.13
NCK1P16333 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 AK4P3-201ENST00000418260 669 ntBASIC15.89■□□□□ 0.13
NCK1P16333 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 AC009533.2-201ENST00000543664 586 ntBASIC15.89■□□□□ 0.13
NCK1P16333 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 AC133561.5-201ENST00000635547 218 ntBASIC15.89■□□□□ 0.13
NCK1P16333 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NCK1P16333 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
NCK1P16333 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.89■□□□□ 0.13
NCK1P16333 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.89■□□□□ 0.13
NCK1P16333 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NCK1P16333 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
NCK1P16333 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.89■□□□□ 0.13
NCK1P16333 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCK1P16333 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NCK1P16333 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.88■□□□□ 0.13
NCK1P16333 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NCK1P16333 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.88■□□□□ 0.13
NCK1P16333 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.88■□□□□ 0.13
NCK1P16333 AC090616.6-201ENST00000582640 721 ntBASIC15.88■□□□□ 0.13
NCK1P16333 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.88■□□□□ 0.13
NCK1P16333 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.88■□□□□ 0.13
NCK1P16333 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.88■□□□□ 0.13
NCK1P16333 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.88■□□□□ 0.13
NCK1P16333 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 AC104640.1-201ENST00000562617 2109 ntBASIC15.88■□□□□ 0.13
NCK1P16333 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.88■□□□□ 0.13
NCK1P16333 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NCK1P16333 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NCK1P16333 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCK1P16333 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms