Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 SPCS2P1-201ENST00000561636 679 ntBASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 LINC01225-203ENST00000563550 1244 ntBASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 MPDU1-223ENST00000582151 728 ntBASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 AC084121.4-201ENST00000641598 221 ntBASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 AF228730.8-201ENST00000642140 221 ntBASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 SLC22A20-204ENST00000530038 1673 ntBASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB40ALP0C0E4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 KRT8P49-201ENST00000604166 1432 ntBASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 AC106820.2-201ENST00000563775 3264 ntBASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 AP001094.4-201ENST00000579008 2176 ntBASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB40ALP0C0E4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 AC131009.4-201ENST00000624048 1740 ntBASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 FAM58DP-201ENST00000428076 619 ntBASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40ALP0C0E4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms