Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM1P09493 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM1P09493 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM1P09493 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM1P09493 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 SPDYE13P-201ENST00000445314 798 ntBASIC18.54■□□□□ 0.56
TPM1P09493 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TPM1P09493 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.54■□□□□ 0.56
TPM1P09493 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.54■□□□□ 0.56
TPM1P09493 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 AC024909.3-201ENST00000611513 2257 ntBASIC18.54■□□□□ 0.56
TPM1P09493 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 ALOX12P2-203ENST00000570921 1945 ntBASIC18.54■□□□□ 0.56
TPM1P09493 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 AC006538.1-201ENST00000567905 1585 ntBASIC18.54■□□□□ 0.56
TPM1P09493 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM1P09493 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TPM1P09493 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM1P09493 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TPM1P09493 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM1P09493 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM1P09493 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM1P09493 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.53■□□□□ 0.56
TPM1P09493 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 AL845331.1-201ENST00000424978 1190 ntBASIC18.53■□□□□ 0.56
TPM1P09493 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM1P09493 KRT18P57-201ENST00000443599 1254 ntBASIC18.53■□□□□ 0.56
TPM1P09493 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.53■□□□□ 0.56
TPM1P09493 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
TPM1P09493 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TPM1P09493 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 AC097493.4-201ENST00000641197 219 ntBASIC18.53■□□□□ 0.56
TPM1P09493 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM1P09493 AC104640.1-201ENST00000562617 2109 ntBASIC18.53■□□□□ 0.56
TPM1P09493 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.53■□□□□ 0.56
TPM1P09493 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPM1P09493 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.52■□□□□ 0.56
TPM1P09493 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM1P09493 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.52■□□□□ 0.56
TPM1P09493 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.52■□□□□ 0.56
TPM1P09493 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPM1P09493 ACTG1P4-201ENST00000425123 1122 ntBASIC18.52■□□□□ 0.56
TPM1P09493 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TPM1P09493 AL671277.2-201ENST00000458060 996 ntBASIC18.52■□□□□ 0.56
TPM1P09493 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms