Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.22■□□□□ 0.35
TOP3BO95985 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.22■□□□□ 0.35
TOP3BO95985 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP3BO95985 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TOP3BO95985 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TOP3BO95985 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP3BO95985 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.22■□□□□ 0.35
TOP3BO95985 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TOP3BO95985 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TOP3BO95985 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
TOP3BO95985 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.35
TOP3BO95985 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 AL049757.1-201ENST00000616842 1596 ntBASIC17.21■□□□□ 0.35
TOP3BO95985 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.21■□□□□ 0.35
TOP3BO95985 TSEN15P1-201ENST00000423257 515 ntBASIC17.21■□□□□ 0.35
TOP3BO95985 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.21■□□□□ 0.35
TOP3BO95985 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 AL031432.2-201ENST00000566714 459 ntBASIC17.21■□□□□ 0.35
TOP3BO95985 AL928711.1-201ENST00000570165 459 ntBASIC17.21■□□□□ 0.35
TOP3BO95985 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 AL035252.4-201ENST00000624174 288 ntBASIC17.21■□□□□ 0.35
TOP3BO95985 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TOP3BO95985 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TOP3BO95985 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.21■□□□□ 0.35
TOP3BO95985 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TOP3BO95985 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TOP3BO95985 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.21■□□□□ 0.34
TOP3BO95985 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TOP3BO95985 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
TOP3BO95985 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TOP3BO95985 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.21■□□□□ 0.34
TOP3BO95985 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.2■□□□□ 0.34
TOP3BO95985 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TOP3BO95985 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TOP3BO95985 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.2■□□□□ 0.34
TOP3BO95985 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.2■□□□□ 0.34
TOP3BO95985 AC005034.1-201ENST00000426657 489 ntBASIC17.2■□□□□ 0.34
TOP3BO95985 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.2■□□□□ 0.34
TOP3BO95985 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.2■□□□□ 0.34
TOP3BO95985 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.2■□□□□ 0.34
TOP3BO95985 MIR4745-201ENST00000577608 62 ntBASIC17.2■□□□□ 0.34
TOP3BO95985 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.2■□□□□ 0.34
TOP3BO95985 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
TOP3BO95985 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP3BO95985 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP3BO95985 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms