Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.24□□□□□ -0.29
CUBNO60494 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CUBNO60494 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.24□□□□□ -0.29
CUBNO60494 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.24□□□□□ -0.29
CUBNO60494 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.24□□□□□ -0.29
CUBNO60494 AC105021.1-202ENST00000570572 669 ntBASIC13.24□□□□□ -0.29
CUBNO60494 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.24□□□□□ -0.29
CUBNO60494 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.24□□□□□ -0.29
CUBNO60494 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CUBNO60494 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CUBNO60494 AC087499.6-201ENST00000411576 835 ntBASIC13.24□□□□□ -0.29
CUBNO60494 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.24□□□□□ -0.29
CUBNO60494 PRYP6-201ENST00000514804 343 ntBASIC13.24□□□□□ -0.29
CUBNO60494 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.24□□□□□ -0.29
CUBNO60494 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.24□□□□□ -0.29
CUBNO60494 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.23□□□□□ -0.29
CUBNO60494 AC099336.1-201ENST00000417053 1171 ntBASIC13.23□□□□□ -0.29
CUBNO60494 AL589987.1-201ENST00000453380 819 ntBASIC13.23□□□□□ -0.29
CUBNO60494 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.23□□□□□ -0.29
CUBNO60494 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.23□□□□□ -0.29
CUBNO60494 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CUBNO60494 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
CUBNO60494 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 AC093004.1-201ENST00000508850 424 ntBASIC13.22□□□□□ -0.29
CUBNO60494 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.22□□□□□ -0.29
CUBNO60494 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.22□□□□□ -0.29
CUBNO60494 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CUBNO60494 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.22□□□□□ -0.29
CUBNO60494 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.22□□□□□ -0.29
CUBNO60494 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.22□□□□□ -0.29
CUBNO60494 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.22□□□□□ -0.29
CUBNO60494 AC015936.2-201ENST00000593177 259 ntBASIC13.22□□□□□ -0.29
CUBNO60494 SRD5A3P1-201ENST00000603021 949 ntBASIC13.22□□□□□ -0.29
CUBNO60494 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CUBNO60494 BICD1-207ENST00000551848 1962 ntBASIC13.22□□□□□ -0.29
CUBNO60494 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 PDIA3P1-201ENST00000471856 1510 ntBASIC13.22□□□□□ -0.29
CUBNO60494 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CUBNO60494 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.22□□□□□ -0.29
CUBNO60494 AC055876.2-201ENST00000531834 546 ntBASIC13.22□□□□□ -0.29
CUBNO60494 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.22□□□□□ -0.29
CUBNO60494 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.22□□□□□ -0.29
CUBNO60494 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms