Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.16■□□□□ 0.5
EXTL3O43909 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
EXTL3O43909 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.16■□□□□ 0.5
EXTL3O43909 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
EXTL3O43909 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
EXTL3O43909 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
EXTL3O43909 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EXTL3O43909 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EXTL3O43909 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EXTL3O43909 AC002056.1-201ENST00000395613 760 ntBASIC18.15■□□□□ 0.5
EXTL3O43909 AC092474.2-201ENST00000424288 719 ntBASIC18.15■□□□□ 0.5
EXTL3O43909 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.15■□□□□ 0.5
EXTL3O43909 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.15■□□□□ 0.5
EXTL3O43909 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.15■□□□□ 0.5
EXTL3O43909 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXTL3O43909 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EXTL3O43909 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EXTL3O43909 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
EXTL3O43909 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EXTL3O43909 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EXTL3O43909 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
EXTL3O43909 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.14■□□□□ 0.5
EXTL3O43909 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
EXTL3O43909 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
EXTL3O43909 UBALD1-205ENST00000590891 2641 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EXTL3O43909 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.14■□□□□ 0.49
EXTL3O43909 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 HMGN1P19-201ENST00000436976 333 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.14■□□□□ 0.49
EXTL3O43909 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.14■□□□□ 0.49
EXTL3O43909 AC112191.1-201ENST00000523689 701 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.14■□□□□ 0.49
EXTL3O43909 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.14■□□□□ 0.49
EXTL3O43909 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
EXTL3O43909 AP001160.2-201ENST00000596071 487 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 AC091812.2-201ENST00000619081 385 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 C20orf181-201ENST00000623918 480 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EXTL3O43909 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
EXTL3O43909 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.14■□□□□ 0.49
EXTL3O43909 AL031731.1-201ENST00000642131 2094 ntBASIC18.14■□□□□ 0.49
EXTL3O43909 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EXTL3O43909 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXTL3O43909 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
EXTL3O43909 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.13■□□□□ 0.49
EXTL3O43909 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.13■□□□□ 0.49
EXTL3O43909 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.13■□□□□ 0.49
EXTL3O43909 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 DNAJB3-201ENST00000446806 729 ntBASIC18.13■□□□□ 0.49
EXTL3O43909 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXTL3O43909 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EXTL3O43909 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.13■□□□□ 0.49
EXTL3O43909 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.13■□□□□ 0.49
EXTL3O43909 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms