Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.93■□□□□ 0.78
NFKBIEO00221 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NFKBIEO00221 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.93■□□□□ 0.78
NFKBIEO00221 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.93■□□□□ 0.78
NFKBIEO00221 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NFKBIEO00221 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.93■□□□□ 0.78
NFKBIEO00221 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.93■□□□□ 0.78
NFKBIEO00221 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.93■□□□□ 0.78
NFKBIEO00221 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NFKBIEO00221 ZNF767P-206ENST00000513792 565 ntBASIC19.93■□□□□ 0.78
NFKBIEO00221 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.93■□□□□ 0.78
NFKBIEO00221 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.93■□□□□ 0.78
NFKBIEO00221 AC013467.2-201ENST00000605472 835 ntBASIC19.93■□□□□ 0.78
NFKBIEO00221 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKBIEO00221 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKBIEO00221 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKBIEO00221 AC098818.2-201ENST00000564925 2320 ntBASIC19.92■□□□□ 0.78
NFKBIEO00221 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKBIEO00221 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NFKBIEO00221 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKBIEO00221 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 MIR5189-201ENST00000577370 114 ntBASIC19.92■□□□□ 0.78
NFKBIEO00221 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKBIEO00221 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.92■□□□□ 0.78
NFKBIEO00221 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
NFKBIEO00221 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKBIEO00221 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKBIEO00221 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NFKBIEO00221 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.91■□□□□ 0.78
NFKBIEO00221 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NFKBIEO00221 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NFKBIEO00221 AC005229.1-201ENST00000392885 409 ntBASIC19.91■□□□□ 0.78
NFKBIEO00221 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.91■□□□□ 0.78
NFKBIEO00221 AC104596.2-201ENST00000512793 793 ntBASIC19.91■□□□□ 0.78
NFKBIEO00221 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NFKBIEO00221 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.91■□□□□ 0.78
NFKBIEO00221 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.91■□□□□ 0.78
NFKBIEO00221 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.91■□□□□ 0.78
NFKBIEO00221 AL391069.4-201ENST00000609583 481 ntBASIC19.91■□□□□ 0.78
NFKBIEO00221 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.91■□□□□ 0.78
NFKBIEO00221 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.91■□□□□ 0.78
NFKBIEO00221 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.91■□□□□ 0.78
NFKBIEO00221 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKBIEO00221 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.91■□□□□ 0.78
NFKBIEO00221 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NFKBIEO00221 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKBIEO00221 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NFKBIEO00221 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.9■□□□□ 0.78
NFKBIEO00221 TNXA-203ENST00000507684 2038 ntBASIC19.9■□□□□ 0.78
NFKBIEO00221 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NFKBIEO00221 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.9■□□□□ 0.78
NFKBIEO00221 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKBIEO00221 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms