Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 AC018470.1-201ENST00000624790 3129 ntBASIC17.24■□□□□ 0.35
XIRP2A4UGR9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
XIRP2A4UGR9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 FO681548.1-201ENST00000455617 1132 ntBASIC17.23■□□□□ 0.35
XIRP2A4UGR9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 AC025048.3-201ENST00000590609 569 ntBASIC17.23■□□□□ 0.35
XIRP2A4UGR9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.23■□□□□ 0.35
XIRP2A4UGR9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 KRT8P13-201ENST00000463294 1010 ntBASIC17.23■□□□□ 0.35
XIRP2A4UGR9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 TPRX2P-201ENST00000535362 881 ntBASIC17.23■□□□□ 0.35
XIRP2A4UGR9 FLJ13224-201ENST00000313737 1514 ntBASIC17.23■□□□□ 0.35
XIRP2A4UGR9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.23■□□□□ 0.35
XIRP2A4UGR9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 AC005229.1-201ENST00000392885 409 ntBASIC17.22■□□□□ 0.35
XIRP2A4UGR9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 TOP3BP1-201ENST00000420768 1380 ntBASIC17.22■□□□□ 0.35
XIRP2A4UGR9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 AL133373.2-201ENST00000623187 2828 ntBASIC17.22■□□□□ 0.35
XIRP2A4UGR9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.22■□□□□ 0.35
XIRP2A4UGR9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
XIRP2A4UGR9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.21■□□□□ 0.35
XIRP2A4UGR9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms