Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 AC108751.1-201ENST00000490852 363 ntBASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 AC093909.1-201ENST00000504731 1122 ntBASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC162PA2VCL2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 AC131009.4-201ENST00000624048 1740 ntBASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 UNC93B6-202ENST00000528242 690 ntBASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 AL139011.1-202ENST00000642063 584 ntBASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 AL353732.1-201ENST00000569618 1459 ntBASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 AL671710.1-201ENST00000610245 2349 ntBASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC162PA2VCL2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 AC009947.1-201ENST00000444350 727 ntBASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 HLA-J-202ENST00000469281 1241 ntBASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 RNA5SP415-201ENST00000517246 115 ntBASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 IGHV3-22-201ENST00000520721 359 ntBASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC162PA2VCL2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms