Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AP002383.4-201ENST00000442518 975 ntBASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 KRT17P6-201ENST00000453795 1220 ntBASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AD001527.2-201ENST00000622994 785 ntBASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC073592.5-201ENST00000624854 528 ntBASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 MST1L-201ENST00000442552 2185 ntBASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NSUN5P1-202ENST00000421140 1535 ntBASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NSUN5P2-203ENST00000457352 1529 ntBASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC124947.2-201ENST00000547118 1133 ntBASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC092364.2-201ENST00000596710 2692 ntBASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms