Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB13Q9Y5F0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC104629.1-201ENST00000494226 508 ntBASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 CXCL1P1-201ENST00000502804 216 ntBASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC034105.1-201ENST00000563488 319 ntBASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 MIR4492-201ENST00000581627 80 ntBASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB13Q9Y5F0 AC092171.3-201ENST00000610122 2651 ntBASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 AC131009.4-201ENST00000624048 1740 ntBASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 AL139011.1-202ENST00000642063 584 ntBASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB13Q9Y5F0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB13Q9Y5F0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms