Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC00588Q9Y4M8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 PCDHB17P-201ENST00000539533 2393 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC016027.1-202ENST00000607927 1699 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC006277.1-201ENST00000624348 1610 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 KRT18P32-201ENST00000424695 1287 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 HLA-J-203ENST00000494367 1087 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AL355385.1-201ENST00000606123 409 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 LINC00628-201ENST00000628516 1289 ntBASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00588Q9Y4M8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 UXT-AS1-201ENST00000590504 1525 ntBASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00588Q9Y4M8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms