Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 AC099336.1-202ENST00000602961 463 ntBASIC19.29■□□□□ 0.68
USP25Q9UHP3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.29■□□□□ 0.68
USP25Q9UHP3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 AC079776.2-201ENST00000641154 1609 ntBASIC19.29■□□□□ 0.68
USP25Q9UHP3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP25Q9UHP3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 KRT16P4-201ENST00000453883 522 ntBASIC19.28■□□□□ 0.68
USP25Q9UHP3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP25Q9UHP3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.28■□□□□ 0.68
USP25Q9UHP3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms