Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 PCDHB17P-201ENST00000539533 2393 ntBASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AL391256.1-201ENST00000443260 1855 ntBASIC14□□□□□ -0.17
LIN7CQ9NUP9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 EMD-201ENST00000369835 966 ntTSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 KRT126P-201ENST00000549467 1181 ntBASIC14□□□□□ -0.17
LIN7CQ9NUP9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 IFNL4P1-201ENST00000607083 540 ntBASIC14□□□□□ -0.17
LIN7CQ9NUP9 AL732292.2-201ENST00000609649 430 ntBASIC14□□□□□ -0.17
LIN7CQ9NUP9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LIN7CQ9NUP9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIN7CQ9NUP9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 RBM17P3-201ENST00000417687 1192 ntBASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 ABCD1P5-201ENST00000445663 754 ntBASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms