Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHB16Q9NRJ7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHB16Q9NRJ7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHB16Q9NRJ7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 MIR1224-201ENST00000408193 85 ntBASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 KLF4P1-201ENST00000412782 1185 ntBASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 SPDYE13P-201ENST00000445314 798 ntBASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AL135999.2-201ENST00000622438 1686 ntBASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHB16Q9NRJ7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 AC005336.2-201ENST00000593183 939 ntBASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 AC022188.1-201ENST00000620960 1664 ntBASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHB16Q9NRJ7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHB16Q9NRJ7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms