Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC069262.1-201ENST00000539058 672 ntBASIC18.04■□□□□ 0.48
NXF3Q9H4D5 DUX4L27-201ENST00000554796 1261 ntBASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC005498.2-205ENST00000593218 784 ntBASIC18.04■□□□□ 0.48
NXF3Q9H4D5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 KRT8P39-201ENST00000396270 1433 ntBASIC18.04■□□□□ 0.48
NXF3Q9H4D5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 AC008677.1-201ENST00000519230 1561 ntBASIC18.04■□□□□ 0.48
NXF3Q9H4D5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NXF3Q9H4D5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 AC142381.1-201ENST00000426099 345 ntBASIC18.03■□□□□ 0.48
NXF3Q9H4D5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 ALG1L8P-201ENST00000533887 760 ntBASIC18.03■□□□□ 0.48
NXF3Q9H4D5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.03■□□□□ 0.48
NXF3Q9H4D5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NXF3Q9H4D5 AC051619.7-201ENST00000568314 623 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 564.3 ms