Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLIRPQ9GZT3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 AL671710.1-201ENST00000610245 2349 ntBASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLIRPQ9GZT3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 CD177P1-201ENST00000606252 935 ntBASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 IKBKGP1-201ENST00000612193 1073 ntBASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 AL049757.1-201ENST00000616842 1596 ntBASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLIRPQ9GZT3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLIRPQ9GZT3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms