Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 RPPH1-201ENST00000516869 333 ntBASIC11.18□□□□□ -0.62
LITAFQ99732 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
LITAFQ99732 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.18□□□□□ -0.62
LITAFQ99732 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.18□□□□□ -0.62
LITAFQ99732 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.18□□□□□ -0.62
LITAFQ99732 AC104771.1-201ENST00000603335 964 ntBASIC11.18□□□□□ -0.62
LITAFQ99732 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 AL671710.1-201ENST00000610245 2349 ntBASIC11.18□□□□□ -0.62
LITAFQ99732 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.18□□□□□ -0.62
LITAFQ99732 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LITAFQ99732 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LITAFQ99732 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LITAFQ99732 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.17□□□□□ -0.62
LITAFQ99732 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.17□□□□□ -0.62
LITAFQ99732 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LITAFQ99732 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 AC122714.2-201ENST00000502787 707 ntBASIC11.17□□□□□ -0.62
LITAFQ99732 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.17□□□□□ -0.62
LITAFQ99732 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.17□□□□□ -0.62
LITAFQ99732 LINC01101-201ENST00000622953 1884 ntBASIC11.17□□□□□ -0.62
LITAFQ99732 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LITAFQ99732 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LITAFQ99732 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
LITAFQ99732 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.16□□□□□ -0.62
LITAFQ99732 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LITAFQ99732 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms