Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDNQ99608 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.9■□□□□ 0.3
NDNQ99608 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NDNQ99608 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NDNQ99608 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.89■□□□□ 0.29
NDNQ99608 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 AL391256.1-201ENST00000443260 1855 ntBASIC16.89■□□□□ 0.29
NDNQ99608 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.89■□□□□ 0.29
NDNQ99608 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.89■□□□□ 0.29
NDNQ99608 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NDNQ99608 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.89■□□□□ 0.29
NDNQ99608 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.89■□□□□ 0.29
NDNQ99608 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.89■□□□□ 0.29
NDNQ99608 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.89■□□□□ 0.29
NDNQ99608 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.89■□□□□ 0.29
NDNQ99608 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
NDNQ99608 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
NDNQ99608 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDNQ99608 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
NDNQ99608 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.89■□□□□ 0.29
NDNQ99608 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
NDNQ99608 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.89■□□□□ 0.29
NDNQ99608 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDNQ99608 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NDNQ99608 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 HLA-A-202ENST00000376806 1854 ntBASIC16.88■□□□□ 0.29
NDNQ99608 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NDNQ99608 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.88■□□□□ 0.29
NDNQ99608 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NDNQ99608 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 REXO1L6P-202ENST00000619970 1078 ntBASIC16.88■□□□□ 0.29
NDNQ99608 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NDNQ99608 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
NDNQ99608 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NDNQ99608 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.88■□□□□ 0.29
NDNQ99608 AC132872.4-202ENST00000622924 2756 ntBASIC16.88■□□□□ 0.29
NDNQ99608 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDNQ99608 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NDNQ99608 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NDNQ99608 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
NDNQ99608 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.87■□□□□ 0.29
NDNQ99608 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
NDNQ99608 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.87■□□□□ 0.29
NDNQ99608 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.87■□□□□ 0.29
NDNQ99608 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.87■□□□□ 0.29
NDNQ99608 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDNQ99608 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms