Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H4Q96RI1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 CICP14-201ENST00000629111 2732 ntBASIC15.85■□□□□ 0.13
NR1H4Q96RI1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 AC008040.2-201ENST00000461049 708 ntBASIC15.85■□□□□ 0.13
NR1H4Q96RI1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NR1H4Q96RI1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 KRT18P29-201ENST00000397031 1267 ntBASIC15.84■□□□□ 0.13
NR1H4Q96RI1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 AC011506.1-201ENST00000474329 610 ntBASIC15.84■□□□□ 0.13
NR1H4Q96RI1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 AC130371.2-201ENST00000619443 611 ntBASIC15.84■□□□□ 0.13
NR1H4Q96RI1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 AC106881.1-201ENST00000605849 3329 ntBASIC15.84■□□□□ 0.13
NR1H4Q96RI1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NR1H4Q96RI1 FRMD8P1-201ENST00000440433 1524 ntBASIC15.84■□□□□ 0.13
NR1H4Q96RI1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NR1H4Q96RI1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms