Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 AL138918.1-201ENST00000568306 659 ntBASIC16.79■□□□□ 0.28
SIPA1Q96FS4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIPA1Q96FS4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 KRT18P34-201ENST00000488218 1270 ntBASIC16.78■□□□□ 0.28
SIPA1Q96FS4 AC069120.2-201ENST00000524091 540 ntBASIC16.78■□□□□ 0.28
SIPA1Q96FS4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.78■□□□□ 0.28
SIPA1Q96FS4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 AL158211.3-201ENST00000607385 239 ntBASIC16.77■□□□□ 0.28
SIPA1Q96FS4 AL390754.1-201ENST00000619088 582 ntBASIC16.77■□□□□ 0.28
SIPA1Q96FS4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.77■□□□□ 0.28
SIPA1Q96FS4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms