Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 PCDHA14-201ENST00000506751 2298 ntBASIC16.15■□□□□ 0.18
UBE2E3Q969T4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AC108751.1-201ENST00000490852 363 ntBASIC16.15■□□□□ 0.18
UBE2E3Q969T4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 AC004790.2-201ENST00000623588 572 ntBASIC16.15■□□□□ 0.18
UBE2E3Q969T4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
UBE2E3Q969T4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
UBE2E3Q969T4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
UBE2E3Q969T4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
UBE2E3Q969T4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.14■□□□□ 0.17
UBE2E3Q969T4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 KRT8P39-201ENST00000396270 1433 ntBASIC16.14■□□□□ 0.17
UBE2E3Q969T4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 MIR7706-201ENST00000613747 67 ntBASIC16.14■□□□□ 0.17
UBE2E3Q969T4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 AL118508.1-201ENST00000613502 2345 ntBASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2E3Q969T4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2E3Q969T4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms