Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 AL513477.1-201ENST00000602865 2407 ntBASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDND2Q8NHS1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 HTR5BP-201ENST00000430851 1154 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 RHOQP3-201ENST00000437982 621 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 AP006288.1-201ENST00000446065 395 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 AL596442.2-201ENST00000610240 980 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 AC007064.4-201ENST00000637740 555 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 FLJ38576-201ENST00000623820 2459 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 AC025580.3-201ENST00000617932 1424 ntBASIC14.32□□□□□ -0.12
CLDND2Q8NHS1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 LINC00304-203ENST00000565008 1864 ntBASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 PCDHA1-201ENST00000378133 2726 ntBASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 CROCCP1-201ENST00000426910 5675 ntBASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 MKNK2P1-201ENST00000437526 628 ntBASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 CXCL1P1-201ENST00000502804 216 ntBASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AC023141.13-201ENST00000604991 943 ntBASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDND2Q8NHS1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms