Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS1Q8NFJ9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AP002383.4-201ENST00000442518 975 ntBASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 Z69720.1-201ENST00000601483 472 ntBASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 KRT8P49-201ENST00000604166 1432 ntBASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.15■□□□□ 0.02
BBS1Q8NFJ9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 TMPOP1-202ENST00000424642 1267 ntBASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 TSSC2-201ENST00000450217 709 ntBASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms